Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent chaperone clpb | PS417_RS23950 | Not Available | Positive | 863397 - 865961 | 95308.6 |
| Trna-asn | Not Available | Not Available | Positive | 866262 - 866337 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 866348 - 866424 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 866430 - 866505 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 866600 - 866676 | Not Available |
| nad(p)/fad-dependent oxidoreductase | PS417_RS23925 | Not Available | Negative | 866869 - 868167 | 46899.7 |
| duf3094 family protein | PS417_RS27745 | Not Available | Negative | 868228 - 868401 | 6655.3 |
| duf1780 domain-containing protein | PS417_RS23920 | Not Available | Negative | 868456 - 869085 | 24362.1 |
| hypothetical protein | PS417_RS23915 | Not Available | Positive | 869189 - 869656 | 17225.1 |
| energy-coupling factor abc transporter permease | PS417_RS23910 | Not Available | Positive | 869653 - 870342 | 25543.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
