Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gsph/fimt family pseudopilin | PS417_RS24000 | Not Available | Negative | 855976 - 856557 | 20674.6 |
| type iv pilus modification protein pilv | PS417_RS23995 | Not Available | Positive | 856750 - 857235 | 17065.1 |
| pilw family protein | PS417_RS23990 | Not Available | Positive | 857232 - 857939 | 25012.2 |
| pilx n-terminal domain-containing pilus assembly protein | PS417_RS23985 | Not Available | Positive | 857947 - 858477 | 18699.0 |
| type iv pilin protein | PS417_RS23980 | Not Available | Positive | 858489 - 858890 | 14201.0 |
| glycine oxidase thio | PS417_RS23975 | Not Available | Positive | 858953 - 860062 | 38920.8 |
| pp0621 family protein | PS417_RS23970 | Not Available | Negative | 860049 - 860282 | 8891.83 |
| outer membrane protein assembly factor bamd | PS417_RS23965 | Not Available | Negative | 860407 - 861432 | 38697.3 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | PS417_RS23960 | Not Available | Positive | 861582 - 862544 | 35461.9 |
| peptidoglycan editing factor pgef | PS417_RS23955 | Not Available | Positive | 862541 - 863266 | 26109.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
