Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate acetyltransferase | PS417_RS24045 | Not Available | Negative | 844773 - 846872 | 75391.4 |
| duf3565 domain-containing protein | PS417_RS27740 | Not Available | Negative | 846952 - 847242 | 11135.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | PS417_RS24040 | Not Available | Positive | 847241 - 847726 | 16948.7 |
| 30s ribosomal protein s20 | PS417_RS24035 | Not Available | Negative | 847982 - 848260 | 10084.4 |
| murein biosynthesis integral membrane protein murj | PS417_RS24030 | Not Available | Positive | 848514 - 850052 | 55987.7 |
| bifunctional riboflavin kinase/fad synthetase | PS417_RS24025 | Not Available | Positive | 850172 - 851110 | 34302.3 |
| isoleucine--trna ligase | PS417_RS24020 | Not Available | Positive | 851125 - 853956 | 105733.0 |
| signal peptidase ii | PS417_RS24015 | Not Available | Positive | 853949 - 854461 | 18854.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | PS417_RS24010 | Not Available | Positive | 854469 - 854906 | 15848.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | PS417_RS24005 | Not Available | Positive | 855075 - 856022 | 34506.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
