Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr02450 family trp-rich protein | PS417_RS24095 | Not Available | Negative | 833025 - 833240 | 8471.26 |
| nad(p)/fad-dependent oxidoreductase | PS417_RS24090 | Not Available | Negative | 833237 - 834223 | 35984.7 |
| tigr01777 family oxidoreductase | PS417_RS24085 | Not Available | Positive | 834433 - 835332 | 32415.6 |
| ferrochelatase | PS417_RS24080 | Not Available | Positive | 835347 - 836372 | 38466.2 |
| tonb-dependent siderophore receptor | PS417_RS24075 | Not Available | Negative | 836498 - 838594 | 76740.1 |
| do family serine endopeptidase algw | PS417_RS24070 | Not Available | Negative | 838705 - 839859 | 40610.4 |
| nif3-like dinuclear metal center hexameric protein | PS417_RS24065 | Not Available | Positive | 839961 - 840719 | 27516.0 |
| sulfate adenylyltransferase subunit cysd | PS417_RS24060 | Not Available | Positive | 840870 - 841787 | 35266.2 |
| sulfate adenylyltransferase subunit cysn | PS417_RS24055 | Not Available | Positive | 841797 - 843695 | 68926.1 |
| acyltransferase | PS417_RS24050 | Not Available | Negative | 843873 - 844772 | 34673.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
