Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ykgj family cysteine cluster protein | PS417_RS27735 | Not Available | Negative | 824242 - 824547 | 11389.7 |
| duf2878 domain-containing protein | PS417_RS24140 | Not Available | Negative | 824601 - 825080 | 17052.5 |
| sam-dependent methyltransferase | PS417_RS24135 | Not Available | Negative | 825073 - 826344 | 47809.9 |
| duf1365 domain-containing protein | PS417_RS24130 | Not Available | Negative | 826331 - 827140 | 30868.2 |
| nad(p)/fad-dependent oxidoreductase | PS417_RS24125 | Not Available | Negative | 827137 - 828384 | 46617.5 |
| sdr family nad(p)-dependent oxidoreductase | PS417_RS24120 | Not Available | Negative | 828381 - 829163 | 28193.2 |
| nuclear transport factor 2 family protein | PS417_RS24115 | Not Available | Negative | 829160 - 829582 | 16474.8 |
| deoxyribodipyrimidine photo-lyase | PS417_RS24110 | Not Available | Negative | 829575 - 831020 | 54171.4 |
| merr family transcriptional regulator | PS417_RS24105 | Not Available | Negative | 831021 - 831950 | 34780.1 |
| ybga family protein | PS417_RS24100 | Not Available | Negative | 831954 - 832913 | 35628.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
