Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gln | Not Available | Not Available | Positive | 815245 - 815319 | Not Available |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | PS417_RS24185 | Not Available | Negative | 815356 - 816159 | 29016.9 |
| lipoprotein insertase outer membrane protein lolb | PS417_RS24180 | Not Available | Negative | 816209 - 816826 | 22986.3 |
| tetratricopeptide repeat protein | PS417_RS24175 | Not Available | Negative | 816831 - 818555 | 64678.6 |
| glutamyl-trna reductase | PS417_RS24170 | Not Available | Positive | 818739 - 820028 | 46722.2 |
| peptide chain release factor 1 | PS417_RS24165 | Not Available | Positive | 820025 - 821107 | 39830.8 |
| peptide chain release factor n(5)-glutamine methyltransferase | PS417_RS24160 | Not Available | Positive | 821108 - 821938 | 29891.8 |
| molybdopterin-synthase adenylyltransferase moeb | PS417_RS24155 | Not Available | Positive | 821932 - 822687 | 26711.3 |
| glutamate racemase | PS417_RS24150 | Not Available | Positive | 822680 - 823474 | 28399.7 |
| acyloxyacyl hydrolase | PS417_RS24145 | Not Available | Positive | 823587 - 824105 | 18631.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
