Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system stator protein sctl | PS417_RS24230 | Not Available | Negative | 807504 - 808115 | 22737.0 |
| hypothetical protein | PS417_RS24225 | Not Available | Negative | 808118 - 808675 | 20933.1 |
| type iii secretion system inner membrane ring lipoprotein sctj | PS417_RS24220 | Not Available | Negative | 808668 - 809489 | 30157.7 |
| hypothetical protein | PS417_RS29350 | Not Available | Negative | 809496 - 809858 | 12948.4 |
| hypothetical protein | PS417_RS28990 | Not Available | Negative | 809967 - 810167 | 6654.58 |
| sigma 54-interacting transcriptional regulator | PS417_RS24215 | Not Available | Negative | 810332 - 811258 | 34401.9 |
| redox-regulated atpase ychf | PS417_RS24210 | Not Available | Negative | 811651 - 812751 | 39821.0 |
| aminoacyl-trna hydrolase | PS417_RS24205 | Not Available | Negative | 812773 - 813357 | 21013.4 |
| 50s ribosomal protein l25/general stress protein ctc | PS417_RS24200 | Not Available | Negative | 813525 - 814121 | 21219.5 |
| ribose-phosphate pyrophosphokinase | PS417_RS24195 | Not Available | Negative | 814259 - 815200 | 34146.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
