Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flim/flin family flagellar motor switch protein | PS417_RS24280 | Not Available | Positive | 800283 - 801296 | 36165.3 |
| type iii secretion system export apparatus subunit sctr | PS417_RS24275 | Not Available | Positive | 801293 - 801946 | 23812.4 |
| type iii secretion system export apparatus subunit scts | PS417_RS24270 | Not Available | Positive | 801954 - 802217 | 9416.28 |
| type iii secretion system export apparatus subunit sctt | PS417_RS24265 | Not Available | Positive | 802228 - 803016 | 28240.0 |
| type iii secretion system export apparatus subunit sctu | PS417_RS24260 | Not Available | Positive | 803013 - 804110 | 41237.4 |
| transcriptional regulator | PS417_RS24255 | Not Available | Negative | 804111 - 804464 | 12667.5 |
| hrpt family type iii secretion system protein | PS417_RS24250 | Not Available | Negative | 804461 - 804664 | 7469.15 |
| type iii secretion system outer membrane ring subunit sctc | PS417_RS24245 | Not Available | Negative | 804661 - 806802 | 79601.0 |
| hypothetical protein | PS417_RS29345 | Not Available | Negative | 806817 - 807065 | 9405.49 |
| hypothetical protein | PS417_RS24235 | Not Available | Negative | 807211 - 807429 | 8571.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
