Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative large terminase subunit | PS417_RS17905 | Not Available | Positive | 2161058 - 2162359 | 48604.4 |
| Portal protein | PS417_RS17900 | Not Available | Positive | 2162356 - 2163774 | 52185.5 |
| Putative head protein, spp1 gp7 family | PS417_RS17895 | Not Available | Positive | 2163749 - 2164837 | 39640.8 |
| hypothetical protein | PS417_RS17890 | Not Available | Negative | 2164843 - 2165367 | 19410.2 |
| Hypothetical protein | PS417_RS17885 | Not Available | Positive | 2165505 - 2166233 | 26118.8 |
| Major capsid protein | PS417_RS17880 | Not Available | Positive | 2166246 - 2167211 | 34373.4 |
| hypothetical protein | PS417_RS17875 | Not Available | Positive | 2167259 - 2167840 | 20819.6 |
| Virion protein | PS417_RS17870 | Not Available | Positive | 2167900 - 2168403 | 18274.8 |
| hypothetical protein | PS417_RS29035 | Not Available | Positive | 2168441 - 2168605 | 5958.12 |
| Tail attachment protein | PS417_RS17865 | Not Available | Positive | 2168666 - 2169034 | 13280.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
