Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain fatty acid transporter | PS417_RS24425 | Not Available | Negative | 762804 - 764222 | 50645.6 |
| mfs transporter | PS417_RS24420 | Not Available | Positive | 764408 - 765697 | 46162.1 |
| gluconate:h+ symporter | PS417_RS24415 | Not Available | Negative | 765701 - 767071 | 47094.0 |
| tolc family protein | PS417_RS24410 | Not Available | Positive | 767314 - 768534 | 44255.6 |
| efflux rnd transporter periplasmic adaptor subunit | PS417_RS24405 | Not Available | Positive | 768553 - 769659 | 39629.1 |
| cusa/czca family heavy metal efflux rnd transporter | PS417_RS24400 | Not Available | Positive | 769678 - 772815 | 112929.0 |
| heavy metal sensor histidine kinase | PS417_RS24395 | Not Available | Negative | 772739 - 774175 | 52364.5 |
| heavy metal response regulator transcription factor | PS417_RS24390 | Not Available | Negative | 774172 - 774846 | 25691.1 |
| oprd family porin | PS417_RS24385 | Not Available | Negative | 775191 - 776510 | 48206.3 |
| duf2790 domain-containing protein | PS417_RS24380 | Not Available | Positive | 776736 - 777068 | 11921.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
