Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | PS417_RS24525 | Not Available | Negative | 737763 - 738422 | 24487.3 |
| uracil-xanthine permease family protein | PS417_RS24520 | Not Available | Negative | 738510 - 739904 | 48385.5 |
| lysr family transcriptional regulator | PS417_RS24515 | Not Available | Negative | 739993 - 740913 | 34078.1 |
| aspartate aminotransferase family protein | PS417_RS24510 | Not Available | Positive | 741039 - 742388 | 48668.2 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | PS417_RS24505 | Not Available | Positive | 742428 - 743924 | 53450.1 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 744434 - 747325 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 747482 - 747597 | Not Available |
| paraquat-inducible protein a | PS417_RS24490 | Not Available | Positive | 747756 - 748415 | 24105.2 |
| paraquat-inducible protein a | PS417_RS24485 | Not Available | Positive | 748402 - 749025 | 22713.1 |
| pqib family protein | PS417_RS24480 | Not Available | Positive | 749018 - 751321 | 83247.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
