Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PS417_RS24575 | Not Available | Negative | 728990 - 729172 | 6729.01 |
| zinc-binding alcohol dehydrogenase family protein | PS417_RS24570 | Not Available | Negative | 729319 - 730332 | 36035.3 |
| putative quinol monooxygenase | PS417_RS24565 | Not Available | Negative | 730477 - 730770 | 11048.1 |
| lysr family transcriptional regulator | PS417_RS24560 | Not Available | Positive | 730889 - 731815 | 34219.2 |
| arsr/smtb family transcription factor | PS417_RS24555 | Not Available | Positive | 731953 - 732642 | 24433.8 |
| adenosine deaminase | PS417_RS24550 | Not Available | Negative | 732667 - 733620 | 35972.9 |
| calcium:proton antiporter | PS417_RS24545 | Not Available | Positive | 733815 - 734906 | 38921.7 |
| 8-oxoguanine deaminase | PS417_RS24540 | Not Available | Negative | 734907 - 736262 | 48789.6 |
| sdr family oxidoreductase | PS417_RS24535 | Not Available | Negative | 736447 - 737133 | 24309.2 |
| impact family protein | PS417_RS24530 | Not Available | Negative | 737169 - 737750 | 20965.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
