Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| collagen-like triple helix repeat-containing protein | PS417_RS27715 | Not Available | Negative | 717613 - 719256 | 47861.1 |
| maoc family dehydratase | PS417_RS24620 | Not Available | Negative | 719558 - 720406 | 30861.5 |
| 3-oxoacyl-acp reductase | PS417_RS24615 | Not Available | Negative | 720409 - 721752 | 47205.7 |
| acetyl-coa c-acetyltransferase | PS417_RS24610 | Not Available | Positive | 721867 - 723144 | 45385.8 |
| pa4780 family rio1-like protein kinase | PS417_RS24605 | Not Available | Positive | 723269 - 724165 | 33206.6 |
| cu(i)-responsive transcriptional regulator | PS417_RS24600 | Not Available | Negative | 724311 - 724712 | 14965.9 |
| heavy metal translocating p-type atpase | PS417_RS24595 | Not Available | Negative | 724709 - 726910 | 76839.5 |
| hypothetical protein | PS417_RS24590 | Not Available | Negative | 726977 - 727357 | 13562.6 |
| heavy-metal-associated domain-containing protein | PS417_RS24585 | Not Available | Positive | 727505 - 727702 | 6852.18 |
| multidrug effflux mfs transporter | PS417_RS24580 | Not Available | Positive | 727788 - 728981 | 41403.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
