Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | PS417_RS24670 | Not Available | Negative | 707604 - 708314 | 25256.5 |
| type ii secretion system f family protein | PS417_RS24665 | Not Available | Negative | 708325 - 709212 | 32395.6 |
| type ii secretion system f family protein | PS417_RS24660 | Not Available | Negative | 709214 - 710095 | 33039.9 |
| cpaf family protein | PS417_RS24655 | Not Available | Negative | 710106 - 711377 | 47159.2 |
| hypothetical protein | PS417_RS24650 | Not Available | Negative | 711374 - 712567 | 42891.2 |
| type ii and iii secretion system protein family protein | PS417_RS24645 | Not Available | Negative | 712564 - 713781 | 43304.0 |
| flp pilus assembly protein cpab | PS417_RS24640 | Not Available | Negative | 713801 - 714742 | 32835.6 |
| flp family type ivb pilin | PS417_RS24635 | Not Available | Positive | 715075 - 715266 | 6862.68 |
| response regulator | PS417_RS24630 | Not Available | Positive | 715325 - 715729 | 15170.5 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | PS417_RS24625 | Not Available | Negative | 715758 - 717440 | 62521.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
