Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mazg-like family protein | PS417_RS24720 | Not Available | Positive | 698343 - 698651 | 11797.1 |
| methyltransferase | PS417_RS24715 | Not Available | Positive | 698644 - 699393 | 28177.1 |
| duf4136 domain-containing protein | PS417_RS24710 | Not Available | Positive | 699418 - 700020 | 21631.4 |
| duf4136 domain-containing protein | PS417_RS24705 | Not Available | Positive | 700066 - 700623 | 20812.4 |
| pilus assembly protein tadg-related protein | PS417_RS24700 | Not Available | Positive | 700779 - 702725 | 65672.7 |
| atp-binding protein | PS417_RS24695 | Not Available | Negative | 702722 - 705448 | 101745.0 |
| tade/tadg family type iv pilus assembly protein | PS417_RS24690 | Not Available | Negative | 705445 - 705888 | 15822.1 |
| prepilin peptidase | PS417_RS24685 | Not Available | Positive | 705961 - 706410 | 16050.9 |
| response regulator transcription factor | PS417_RS24680 | Not Available | Positive | 706536 - 707324 | 29110.9 |
| duf3613 domain-containing protein | PS417_RS24675 | Not Available | Negative | 707321 - 707593 | 9710.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
