Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | PS417_RS24770 | Not Available | Negative | 680503 - 682464 | 69660.0 |
| response regulator | PS417_RS24765 | Not Available | Negative | 682518 - 684188 | 62876.4 |
| duf2333 family protein | PS417_RS24760 | Not Available | Positive | 684487 - 685554 | 39380.8 |
| nudix hydrolase | PS417_RS24755 | Not Available | Positive | 685557 - 686093 | 20108.7 |
| translation initiation factor sui1 | PS417_RS24750 | Not Available | Positive | 686276 - 686647 | 12794.6 |
| arginine decarboxylase | PS417_RS24745 | Not Available | Positive | 686790 - 688703 | 71167.5 |
| mate family efflux transporter | PS417_RS24740 | Not Available | Negative | 688835 - 690178 | 48341.1 |
| alpha-2-macroglobulin family protein | PS417_RS24735 | Not Available | Positive | 690357 - 695255 | 178198.0 |
| hypothetical protein | PS417_RS24730 | Not Available | Negative | 695355 - 695648 | 10618.5 |
| peptidoglycan glycosyltransferase pbpc | PS417_RS24725 | Not Available | Positive | 695879 - 698191 | 84442.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
