Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | PS417_RS24820 | Not Available | Negative | 667917 - 670688 | 102020.0 |
| phosphoribosylamine--glycine ligase | PS417_RS24815 | Not Available | Negative | 670789 - 672081 | 45423.4 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | PS417_RS24810 | Not Available | Negative | 672256 - 673863 | 57327.4 |
| dna-binding transcriptional regulator fis | PS417_RS24805 | Not Available | Negative | 673946 - 674266 | 11722.1 |
| trna dihydrouridine synthase dusb | PS417_RS24800 | Not Available | Negative | 674263 - 675276 | 36522.1 |
| duf3426 domain-containing protein | PS417_RS24795 | Not Available | Negative | 675462 - 676676 | 45378.3 |
| 50s ribosomal protein l11 methyltransferase | PS417_RS24790 | Not Available | Negative | 676707 - 677585 | 31738.5 |
| acetyl-coa carboxylase biotin carboxylase subunit | PS417_RS24785 | Not Available | Negative | 677865 - 679226 | 49474.4 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | PS417_RS24780 | Not Available | Negative | 679244 - 679708 | 16241.7 |
| type ii 3-dehydroquinate dehydratase | PS417_RS24775 | Not Available | Negative | 679733 - 680188 | 16596.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
