Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative ning family protein | PS417_RS17955 | Not Available | Positive | 2155358 - 2155993 | 23698.8 |
| Hypothetical protein | PS417_RS17950 | Not Available | Positive | 2155990 - 2156667 | 25251.3 |
| hypothetical protein | PS417_RS17945 | Not Available | Negative | 2156842 - 2157603 | 28446.3 |
| Holin | PS417_RS17940 | Not Available | Positive | 2157804 - 2158142 | 12341.2 |
| Hypothetical protein | PS417_RS17935 | Not Available | Positive | 2158139 - 2158483 | 12480.6 |
| hypothetical protein | PS417_RS29405 | Not Available | Positive | 2158603 - 2158794 | 7157.7 |
| hypothetical protein | PS417_RS17925 | Not Available | Positive | 2158856 - 2159047 | 6635.01 |
| hypothetical protein | PS417_RS17920 | Not Available | Positive | 2159044 - 2159298 | 8865.94 |
| Putative transposase | PS417_RS17915 | Not Available | Positive | 2159956 - 2160579 | 22772.9 |
| Hypothetical protein | PS417_RS17910 | Not Available | Positive | 2160610 - 2161071 | 17205.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
