Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dnaj c-terminal domain-containing protein | PS417_RS24970 | Not Available | Positive | 632255 - 633199 | 34045.3 |
| urease subunit alpha | PS417_RS24965 | Not Available | Negative | 633273 - 634973 | 60599.4 |
| urease subunit beta | PS417_RS24960 | Not Available | Negative | 635087 - 635392 | 11081.1 |
| gnat family n-acetyltransferase | PS417_RS24955 | Not Available | Negative | 635389 - 635922 | 19669.6 |
| gnat family n-acetyltransferase | PS417_RS24950 | Not Available | Negative | 635928 - 636440 | 18974.6 |
| urease subunit gamma | PS417_RS24945 | Not Available | Negative | 636450 - 636752 | 11052.5 |
| urease accessory protein ured | PS417_RS24940 | Not Available | Negative | 636914 - 637753 | 30697.0 |
| urea abc transporter atp-binding subunit urte | PS417_RS24935 | Not Available | Negative | 637785 - 638483 | 25499.3 |
| urea abc transporter atp-binding protein urtd | PS417_RS24930 | Not Available | Negative | 638496 - 639329 | 30086.2 |
| urea abc transporter permease subunit urtc | PS417_RS24925 | Not Available | Negative | 639326 - 640393 | 38558.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
