Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asma family protein | PS417_RS25020 | Not Available | Positive | 621731 - 623800 | 74126.6 |
| ferritin-like domain-containing protein | PS417_RS25015 | Not Available | Negative | 624002 - 624532 | 19885.3 |
| lysr substrate-binding domain-containing protein | PS417_RS25010 | Not Available | Negative | 624631 - 625530 | 33297.8 |
| fmn-dependent nadh-azoreductase | PS417_RS25005 | Not Available | Positive | 625667 - 626308 | 23673.3 |
| esterase/lipase family protein | PS417_RS25000 | Not Available | Positive | 626389 - 627279 | 32468.9 |
| dmt family transporter | PS417_RS24995 | Not Available | Negative | 627276 - 628145 | 31062.6 |
| arac family transcriptional regulator | PS417_RS24990 | Not Available | Positive | 628243 - 629031 | 29772.4 |
| psif family protein | PS417_RS24985 | Not Available | Positive | 629103 - 629405 | 10783.4 |
| ai-2e family transporter | PS417_RS24980 | Not Available | Positive | 629599 - 630612 | 36558.7 |
| hsp70 family protein | PS417_RS24975 | Not Available | Negative | 630748 - 632016 | 46593.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
