Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | PS417_RS25070 | Not Available | Positive | 613838 - 614605 | 27506.9 |
| cation diffusion facilitator family transporter | PS417_RS25065 | Not Available | Positive | 614785 - 615690 | 33474.3 |
| age family epimerase/isomerase | PS417_RS25060 | Not Available | Negative | 615662 - 616780 | 41580.7 |
| hupe/urej family protein | PS417_RS25055 | Not Available | Negative | 616962 - 617534 | 18859.5 |
| urease accessory protein ureg | PS417_RS25050 | Not Available | Negative | 617557 - 618171 | 21792.3 |
| urease accessory protein uref | PS417_RS25045 | Not Available | Negative | 618185 - 618859 | 24917.8 |
| urease accessory protein uree | PS417_RS25040 | Not Available | Negative | 618856 - 619356 | 18664.2 |
| c40 family peptidase | PS417_RS25035 | Not Available | Positive | 619633 - 620130 | 17877.3 |
| tetr family transcriptional regulator | PS417_RS25030 | Not Available | Negative | 620136 - 620768 | 23287.6 |
| hypothetical protein | PS417_RS25025 | Not Available | Negative | 620919 - 621371 | 16016.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
