Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ammonia-dependent nad(+) synthetase | PS417_RS25120 | Not Available | Negative | 601278 - 602105 | 29828.5 |
| nicotinate phosphoribosyltransferase | PS417_RS25115 | Not Available | Negative | 602109 - 603323 | 46486.1 |
| lysr family transcriptional regulator | PS417_RS25110 | Not Available | Negative | 603531 - 604421 | 34014.9 |
| aldehyde dehydrogenase family protein | PS417_RS25105 | Not Available | Positive | 604576 - 606066 | 53514.9 |
| nad(p)/fad-dependent oxidoreductase | PS417_RS25100 | Not Available | Positive | 606246 - 607529 | 46183.0 |
| branched-chain amino acid abc transporter substrate-binding protein | PS417_RS25095 | Not Available | Positive | 607904 - 609040 | 40002.6 |
| abc transporter permease subunit | PS417_RS25090 | Not Available | Positive | 609272 - 610186 | 32469.9 |
| high-affinity branched-chain amino acid abc transporter permease livm | PS417_RS25085 | Not Available | Positive | 610189 - 611466 | 45765.8 |
| abc transporter atp-binding protein | PS417_RS25080 | Not Available | Positive | 611463 - 612338 | 32520.6 |
| abc transporter atp-binding protein | PS417_RS25075 | Not Available | Positive | 612335 - 613051 | 26305.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
