Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l9 | PS417_RS25170 | Not Available | Positive | 587271 - 587717 | 15498.4 |
| replicative dna helicase | PS417_RS25165 | Not Available | Positive | 587827 - 589224 | 51518.2 |
| ygiq family radical sam protein | PS417_RS25160 | Not Available | Positive | 589321 - 591624 | 85962.0 |
| hypothetical protein | PS417_RS25155 | Not Available | Positive | 591743 - 592675 | 33468.5 |
| hypothetical protein | PS417_RS25150 | Not Available | Positive | 592672 - 593121 | 16641.2 |
| duf2126 domain-containing protein | PS417_RS25145 | Not Available | Positive | 593309 - 596599 | 123516.0 |
| circularly permuted type 2 atp-grasp protein | PS417_RS25140 | Not Available | Positive | 596757 - 599243 | 92507.6 |
| transglutaminase family protein | PS417_RS25135 | Not Available | Positive | 599243 - 600133 | 33302.5 |
| hypothetical protein | PS417_RS25130 | Not Available | Negative | 600180 - 600362 | 6778.75 |
| azurin | PS417_RS25125 | Not Available | Positive | 600695 - 601141 | 15764.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
