Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair endonuclease mutl | PS417_RS25270 | Not Available | Positive | 566499 - 568415 | 70204.9 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | PS417_RS25265 | Not Available | Positive | 568415 - 569386 | 35385.4 |
| rna chaperone hfq | PS417_RS25260 | Not Available | Positive | 569482 - 569742 | 9324.28 |
| ribosome rescue gtpase hflx | PS417_RS25255 | Not Available | Positive | 569755 - 571056 | 48926.6 |
| ftsh protease activity modulator hflk | PS417_RS25250 | Not Available | Positive | 571153 - 572328 | 43266.7 |
| protease modulator hflc | PS417_RS25245 | Not Available | Positive | 572328 - 573194 | 32902.3 |
| atp phosphoribosyltransferase regulatory subunit | PS417_RS25240 | Not Available | Positive | 573489 - 574676 | 42716.2 |
| adenylosuccinate synthase | PS417_RS25235 | Not Available | Positive | 574731 - 576020 | 46633.1 |
| methyl-accepting chemotaxis protein | PS417_RS25230 | Not Available | Positive | 576160 - 578094 | 67642.8 |
| abc transporter permease | PS417_RS25225 | Not Available | Negative | 578188 - 579753 | 55875.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
