Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PS417_RS18005 | Not Available | Negative | 2149585 - 2149893 | 11623.9 |
| hypothetical protein | PS417_RS18000 | Not Available | Negative | 2149970 - 2150197 | 8213.01 |
| Hypothetical protein | PS417_RS17995 | Not Available | Negative | 2150202 - 2151107 | 33476.2 |
| Hypothetical protein | PS417_RS17990 | Not Available | Positive | 2151146 - 2151385 | 8475.16 |
| Gp14 | PS417_RS17985 | Not Available | Positive | 2151466 - 2151891 | 15801.9 |
| Putative dna-binding protein (roi) | PS417_RS17980 | Not Available | Positive | 2151962 - 2152762 | 30414.3 |
| Pyocin large subunit | PS417_RS17975 | Not Available | Positive | 2152783 - 2153556 | 29155.0 |
| Putative replication protein p | PS417_RS17970 | Not Available | Positive | 2153553 - 2154266 | 26359.6 |
| hypothetical protein | PS417_RS17965 | Not Available | Positive | 2154263 - 2154583 | 11893.0 |
| Hypothetical protein | PS417_RS17960 | Not Available | Positive | 2154846 - 2155361 | 19583.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
