Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3',5'-cyclic-amp phosphodiesterase | PS417_RS25370 | Not Available | Positive | 543790 - 544605 | 30095.6 |
| yqia/ycfp family alpha/beta fold hydrolase | PS417_RS25365 | Not Available | Positive | 544811 - 545419 | 22106.2 |
| dna topoisomerase iv subunit b | PS417_RS25360 | Not Available | Positive | 545465 - 547372 | 69588.2 |
| esterase-like activity of phytase family protein | PS417_RS25355 | Not Available | Positive | 547372 - 548376 | 36286.3 |
| dna topoisomerase iv subunit a | PS417_RS25350 | Not Available | Positive | 548450 - 550714 | 83504.3 |
| membrane integrity-associated transporter subunit pqic | PS417_RS25345 | Not Available | Positive | 550891 - 551601 | 25530.9 |
| ahpa/ytjb family protein | PS417_RS25340 | Not Available | Negative | 551777 - 553279 | 55523.6 |
| phosphoserine phosphatase serb | PS417_RS25335 | Not Available | Positive | 553413 - 554627 | 43949.0 |
| archaetidylserine decarboxylase | PS417_RS25330 | Not Available | Negative | 554751 - 555611 | 31317.1 |
| rhodanese-like domain-containing protein | PS417_RS25325 | Not Available | Negative | 555627 - 556442 | 29780.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
