Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | PS417_RS25420 | Not Available | Negative | 532496 - 533671 | 41797.6 |
| dmt family transporter | PS417_RS25415 | Not Available | Negative | 533727 - 534062 | 11821.3 |
| lysr family transcriptional regulator | PS417_RS25410 | Not Available | Positive | 534164 - 535054 | 33328.1 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | PS417_RS25405 | Not Available | Positive | 535078 - 536355 | 46505.8 |
| tolc family outer membrane protein | PS417_RS25400 | Not Available | Negative | 536476 - 537915 | 52805.5 |
| phosphomethylpyrimidine synthase thic | PS417_RS25395 | Not Available | Positive | 538366 - 540270 | 70265.8 |
| putative hydroxymethylpyrimidine transporter cytx | PS417_RS25390 | Not Available | Positive | 540437 - 541726 | 44936.2 |
| rsiv family protein | PS417_RS25385 | Not Available | Negative | 541695 - 542441 | 27621.3 |
| nudix domain-containing protein | PS417_RS25380 | Not Available | Positive | 542635 - 543252 | 22963.1 |
| duf1249 domain-containing protein | PS417_RS25375 | Not Available | Positive | 543243 - 543692 | 17242.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
