Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antimicrobial resistance protein mig-14 | PS417_RS25470 | Not Available | Positive | 519933 - 520829 | 33634.3 |
| pig-l deacetylase family protein | PS417_RS25465 | Not Available | Positive | 520826 - 522226 | 52489.3 |
| glycosyltransferase | PS417_RS25460 | Not Available | Positive | 522286 - 523434 | 42782.0 |
| glycosyltransferase | PS417_RS25455 | Not Available | Positive | 523431 - 524312 | 33245.4 |
| o-antigen ligase family protein | PS417_RS25450 | Not Available | Negative | 524368 - 526224 | 69772.2 |
| lipid a export permease/atp-binding protein msba | PS417_RS25445 | Not Available | Positive | 526383 - 528188 | 65974.5 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | PS417_RS25440 | Not Available | Positive | 528302 - 529726 | 50048.3 |
| nad-dependent epimerase/dehydratase family protein | PS417_RS25435 | Not Available | Positive | 529719 - 530645 | 33106.4 |
| hypothetical protein | PS417_RS25430 | Not Available | Negative | 530686 - 531645 | 36816.8 |
| aldo/keto reductase | PS417_RS25425 | Not Available | Negative | 531687 - 532499 | 29296.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
