Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| para family protein | PS417_RS25610 | Not Available | Positive | 473591 - 474361 | 28636.2 |
| duf6124 family protein | PS417_RS25605 | Not Available | Positive | 474846 - 475064 | 7984.72 |
| dna helicase ii | PS417_RS28130 | Not Available | Negative | 475164 - 475597 | 15655.1 |
| protein adenylyltransferase selo | PS417_RS25600 | Not Available | Negative | 475709 - 477172 | 55128.3 |
| mechanosensitive channel msck | PS417_RS25595 | Not Available | Negative | 477221 - 480559 | 123716.0 |
| potassium/proton antiporter | PS417_RS25590 | Not Available | Negative | 480610 - 482352 | 61375.8 |
| methyl-accepting chemotaxis protein | PS417_RS25585 | Not Available | Negative | 482596 - 484221 | 58790.9 |
| hypothetical protein | PS417_RS25580 | Not Available | Positive | 484500 - 484730 | 8245.68 |
| cell division protein zapa | PS417_RS25575 | Not Available | Positive | 484727 - 485020 | 10525.8 |
| acyl-coa dehydrogenase | PS417_RS25570 | Not Available | Negative | 485017 - 486819 | 66349.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
