Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | PS417_RS25660 | Not Available | Negative | 465457 - 465882 | 16075.5 |
| hal/pal/tal family ammonia-lyase | PS417_RS25655 | Not Available | Negative | 465875 - 467416 | 56091.6 |
| glycosyl transferase | PS417_RS25650 | Not Available | Negative | 467400 - 468335 | 35768.1 |
| glycosyltransferase family 2 protein | PS417_RS25645 | Not Available | Negative | 468332 - 469066 | 27490.3 |
| acyl-coa synthetase family protein | PS417_RS25640 | Not Available | Negative | 469059 - 470729 | 61275.7 |
| membrane protein | PS417_RS25635 | Not Available | Negative | 470726 - 471271 | 20495.9 |
| acyl carrier protein | PS417_RS25630 | Not Available | Negative | 471268 - 471522 | 9584.4 |
| phosphopantetheine-binding protein | PS417_RS25625 | Not Available | Negative | 471532 - 471801 | 9640.43 |
| lysophospholipid acyltransferase family protein | PS417_RS25620 | Not Available | Negative | 471779 - 472591 | 29782.2 |
| beta-ketoacyl synthase chain length factor | PS417_RS25615 | Not Available | Negative | 472567 - 473286 | 26621.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
