Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spor domain-containing protein | PS417_RS25810 | Not Available | Negative | 425836 - 426537 | 24983.4 |
| arginine--trna ligase | PS417_RS25805 | Not Available | Negative | 426539 - 428275 | 64044.9 |
| primosomal protein n' | PS417_RS25800 | Not Available | Negative | 428386 - 430605 | 82068.5 |
| 50s ribosomal protein l31 | PS417_RS25795 | Not Available | Positive | 430822 - 431040 | 7961.45 |
| thermonuclease family protein | PS417_RS25790 | Not Available | Positive | 431082 - 431870 | 28288.2 |
| malic enzyme-like nad(p)-binding protein | PS417_RS25785 | Not Available | Positive | 432052 - 433320 | 45035.4 |
| penicillin-binding protein 1a | PS417_RS25780 | Not Available | Negative | 433512 - 435974 | 89097.2 |
| hypothetical protein | PS417_RS28980 | Not Available | Positive | 436023 - 436169 | 5238.2 |
| type iv pilus biogenesis protein pilm | PS417_RS25775 | Not Available | Positive | 436193 - 436846 | 23052.8 |
| piln domain-containing protein | PS417_RS25770 | Not Available | Positive | 436843 - 437397 | 20422.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
