Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | PS417_RS18040 | Not Available | Negative | 2144456 - 2144662 | 7310.85 |
| Hypothetical protein | PS417_RS18035 | Not Available | Negative | 2144868 - 2145392 | 19135.7 |
| hypothetical protein | PS417_RS18030 | Not Available | Negative | 2145457 - 2145711 | 9501.6 |
| Hypothetical protein | PS417_RS18025 | Not Available | Positive | 2146207 - 2146527 | 11961.0 |
| hypothetical protein | PS417_RS29030 | Not Available | Negative | 2146756 - 2147049 | 10778.7 |
| hypothetical protein | PS417_RS18020 | Not Available | Negative | 2147120 - 2147338 | 7744.19 |
| duf2388 domain-containing protein | PS417_RS18015 | Not Available | Negative | 2147513 - 2147839 | 11408.7 |
| Hypothetical protein | PS417_RS18010 | Not Available | Negative | 2147942 - 2148856 | 33325.5 |
| Hypothetical protein | PS417_RS28295 | Not Available | Negative | 2148853 - 2149314 | 16850.9 |
| hypothetical protein | PS417_RS29400 | Not Available | Negative | 2149335 - 2149517 | 6401.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
