Pseudomonas simiae str. WCS417

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas simiae
StrainWCS417

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas simiae str. WCS417
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere; rhizosphere of wheat
Biotic relationshipNot Available
Host(s)Triticum aestivum, Arabidopsis, Brachypodium distachyon
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas simiae strain WCS417 chromosome.

Gene Summary

Adenine Count

1222714 bp

Thymine Count

1224473 bp

Guanine Count

1858679 bp

Cytosine Count

1862205 bp

Genome Length

6169071 bp

Protein-coding Genes

5543 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methyl-accepting chemotaxis proteinPS417_RS25910Not AvailableNegative407805 - 40972167858.5
16s rrna (uracil(1498)-n(3))-methyltransferasePS417_RS25905Not AvailableNegative409809 - 41051625919.2
twin-arginine translocase subunit tatcPS417_RS25900Not AvailableNegative410513 - 41130129235.6
sec-independent protein translocase protein tatbPS417_RS25895Not AvailableNegative411298 - 41170214287.2
twin-arginine translocase tata/tate family subunitPS417_RS25890Not AvailableNegative411713 - 41199110276.4
phosphoribosyl-atp diphosphatasePS417_RS25885Not AvailableNegative412018 - 41235012015.1
phosphoribosyl-amp cyclohydrolasePS417_RS25880Not AvailableNegative412354 - 41274614983.8
ubiquinone biosynthesis regulatory protein kinase ubibPS417_RS25875Not AvailableNegative412788 - 41439261571.5
scp2 domain-containing proteinPS417_RS25870Not AvailableNegative414389 - 41501223055.4
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubiePS417_RS25865Not AvailableNegative415012 - 41578228339.3

Displaying genes 471 – 480 of 5695 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.