Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | PS417_RS25960 | Not Available | Positive | 394841 - 395770 | 32992.5 |
| prolyl aminopeptidase | PS417_RS25955 | Not Available | Positive | 395874 - 396845 | 36724.4 |
| d-aminoacyl-trna deacylase | PS417_RS25950 | Not Available | Positive | 396842 - 397279 | 15398.7 |
| glucan biosynthesis protein g | PS417_RS25945 | Not Available | Positive | 397546 - 399282 | 64910.7 |
| dna helicase ii | PS417_RS25940 | Not Available | Positive | 399275 - 401847 | 96407.1 |
| transporter substrate-binding domain-containing protein | PS417_RS25935 | Not Available | Positive | 402032 - 402832 | 28973.6 |
| transporter substrate-binding domain-containing protein | PS417_RS25930 | Not Available | Positive | 403052 - 403849 | 29771.1 |
| amino acid abc transporter permease | PS417_RS25925 | Not Available | Positive | 404012 - 404971 | 35075.9 |
| amino acid abc transporter atp-binding protein | PS417_RS25920 | Not Available | Positive | 404964 - 405698 | 26888.7 |
| methyl-accepting chemotaxis protein | PS417_RS25915 | Not Available | Negative | 405715 - 407622 | 68482.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
