Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine-cytosine permease family protein | PS417_RS26005 | Not Available | Positive | 382541 - 383998 | 51729.9 |
| abc transporter substrate-binding protein | PS417_RS26000 | Not Available | Positive | 384068 - 385033 | 35197.2 |
| abc transporter permease | PS417_RS25995 | Not Available | Positive | 385105 - 385956 | 30648.7 |
| quaternary amine abc transporter atp-binding protein | PS417_RS27705 | Not Available | Positive | 385953 - 386777 | 30244.0 |
| histidine ammonia-lyase | PS417_RS25990 | Not Available | Positive | 386938 - 388446 | 53408.3 |
| histidine ammonia-lyase | PS417_RS25985 | Not Available | Positive | 388479 - 390017 | 54083.1 |
| amino acid permease | PS417_RS25980 | Not Available | Positive | 390179 - 391588 | 50145.9 |
| imidazolonepropionase | PS417_RS25975 | Not Available | Positive | 391604 - 392809 | 43275.8 |
| n-formylglutamate deformylase | PS417_RS25970 | Not Available | Positive | 392822 - 393622 | 29834.5 |
| choline abc transporter substrate-binding protein | PS417_RS25965 | Not Available | Positive | 393752 - 394687 | 33585.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
