Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen/starch/alpha-glucan phosphorylase | PS417_RS26055 | Not Available | Positive | 368200 - 370650 | 92052.7 |
| duf2339 domain-containing protein | PS417_RS26050 | Not Available | Positive | 370851 - 373922 | 109687.0 |
| duf3999 domain-containing protein | PS417_RS26045 | Not Available | Positive | 373922 - 375277 | 48764.6 |
| class 1 fructose-bisphosphatase | PS417_RS26040 | Not Available | Positive | 375386 - 376396 | 37234.6 |
| hypothetical protein | PS417_RS26035 | Not Available | Positive | 376573 - 376827 | 8855.87 |
| lipocalin family protein | PS417_RS26030 | Not Available | Positive | 376858 - 377427 | 21737.8 |
| formimidoylglutamate deiminase | PS417_RS26025 | Not Available | Negative | 377544 - 378908 | 50198.6 |
| histidine utilization repressor | PS417_RS26020 | Not Available | Positive | 378987 - 379766 | 28906.7 |
| hutd family protein | PS417_RS26015 | Not Available | Positive | 379763 - 380323 | 20329.2 |
| urocanate hydratase | PS417_RS26010 | Not Available | Positive | 380729 - 382399 | 60736.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
