Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (cytidine(34)-2'-o)-methyltransferase | PS417_RS26105 | Not Available | Negative | 356742 - 357197 | 16900.3 |
| hypothetical protein | PS417_RS26100 | Not Available | Positive | 357196 - 357636 | 16027.3 |
| nitrogen regulation protein nr(i) | PS417_RS26095 | Not Available | Negative | 358169 - 359605 | 53187.4 |
| nitrogen regulation protein nr(ii) | PS417_RS26090 | Not Available | Negative | 359602 - 360687 | 40006.5 |
| cupin domain-containing protein | PS417_RS26085 | Not Available | Negative | 360975 - 361400 | 15231.3 |
| chorismate mutase | PS417_RS26080 | Not Available | Negative | 361478 - 362014 | 20111.1 |
| type i glutamate--ammonia ligase | PS417_RS26075 | Not Available | Negative | 362165 - 363571 | 51693.2 |
| trna uracil 4-sulfurtransferase thii | PS417_RS26070 | Not Available | Positive | 363906 - 365360 | 54528.3 |
| translational gtpase typa | PS417_RS26065 | Not Available | Positive | 365500 - 367320 | 67053.5 |
| ykgj family cysteine cluster protein | PS417_RS26060 | Not Available | Negative | 367527 - 367961 | 16732.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
