Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | PS417_RS26155 | Not Available | Positive | 347687 - 348424 | 25670.0 |
| imidazole glycerol phosphate synthase subunit hisf | PS417_RS26150 | Not Available | Positive | 348434 - 349204 | 27085.4 |
| substrate-binding periplasmic protein | PS417_RS26145 | Not Available | Positive | 349271 - 350026 | 27953.9 |
| divergent polysaccharide deacetylase family protein | PS417_RS26140 | Not Available | Negative | 350077 - 350850 | 28015.2 |
| s41 family peptidase | PS417_RS26135 | Not Available | Negative | 350852 - 352168 | 46512.7 |
| murein hydrolase activator envc family protein | PS417_RS26130 | Not Available | Negative | 352199 - 353494 | 47942.9 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | PS417_RS26125 | Not Available | Negative | 353754 - 355280 | 54904.2 |
| rhodanese-like domain-containing protein | PS417_RS26120 | Not Available | Positive | 355432 - 355845 | 14649.0 |
| glutaredoxin 3 | PS417_RS26115 | Not Available | Positive | 355847 - 356101 | 9237.37 |
| protein-export chaperone secb | PS417_RS26110 | Not Available | Positive | 356143 - 356622 | 17640.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
