Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arnt family glycosyltransferase | PS417_RS26205 | Not Available | Positive | 337806 - 339398 | 59484.1 |
| hypothetical protein | PS417_RS26200 | Not Available | Positive | 339518 - 340075 | 21069.4 |
| Trna-phe | Not Available | Not Available | Positive | 340217 - 340292 | Not Available |
| oxidative damage protection protein | PS417_RS26190 | Not Available | Negative | 340396 - 340668 | 10424.5 |
| a/g-specific adenine glycosylase | PS417_RS26185 | Not Available | Negative | 340665 - 341732 | 39630.9 |
| asma family protein | PS417_RS26180 | Not Available | Negative | 341729 - 343939 | 79259.2 |
| ofa family mfs transporter | PS417_RS26175 | Not Available | Positive | 344265 - 345926 | 58777.8 |
| imidazoleglycerol-phosphate dehydratase hisb | PS417_RS26170 | Not Available | Positive | 346158 - 346751 | 21845.2 |
| imidazole glycerol phosphate synthase subunit hish | PS417_RS26165 | Not Available | Positive | 346751 - 347389 | 23369.8 |
| duf2164 domain-containing protein | PS417_RS26160 | Not Available | Positive | 347390 - 347647 | 10077.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
