Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cellulose biosynthesis protein bcsq | PS417_RS26255 | Not Available | Positive | 327786 - 328706 | 33313.5 |
| methyltransferase | PS417_RS26250 | Not Available | Negative | 328947 - 330134 | 44291.2 |
| abc transporter permease | PS417_RS26245 | Not Available | Negative | 330115 - 330804 | 25658.3 |
| abc transporter permease | PS417_RS26240 | Not Available | Negative | 330843 - 331538 | 24915.6 |
| abc transporter substrate-binding protein | PS417_RS26235 | Not Available | Negative | 331613 - 332365 | 27695.9 |
| abc transporter atp-binding protein | PS417_RS26230 | Not Available | Negative | 332379 - 333152 | 28234.2 |
| gaba permease | PS417_RS26225 | Not Available | Positive | 333707 - 335098 | 49564.5 |
| hypothetical protein | PS417_RS26220 | Not Available | Negative | 335207 - 335620 | 15110.5 |
| alpha/beta fold hydrolase | PS417_RS26215 | Not Available | Negative | 335633 - 336577 | 35213.9 |
| arsenic resistance protein | PS417_RS26210 | Not Available | Positive | 336753 - 337718 | 34599.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
