Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | PS417_RS26300 | Not Available | Positive | 315999 - 316868 | 32509.5 |
| aaa family atpase | PS417_RS26295 | Not Available | Negative | 317402 - 319762 | 90270.4 |
| abc-three component system middle component 1 | PS417_RS26290 | Not Available | Negative | 319759 - 320478 | 27584.9 |
| abc-three component system protein | PS417_RS26285 | Not Available | Negative | 320468 - 321907 | 54379.2 |
| hypothetical protein | PS417_RS29340 | Not Available | Negative | 322197 - 322472 | 11165.5 |
| integrase domain-containing protein | PS417_RS26275 | Not Available | Negative | 322469 - 323449 | 36699.5 |
| dna helicase ii | PS417_RS28125 | Not Available | Negative | 324354 - 325682 | 50523.4 |
| Trna-thr | Not Available | Not Available | Positive | 325847 - 325922 | Not Available |
| duf2790 domain-containing protein | PS417_RS26265 | Not Available | Negative | 326046 - 326279 | 8370.74 |
| cellulose biosynthesis protein bcsq | PS417_RS26260 | Not Available | Positive | 326628 - 327578 | 34138.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
