Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_01143 | PS417_RS21990 | Not Available | Positive | 1298206 - 1298925 | Not Available |
| response regulator transcription factor erdr | PS417_RS21985 | Not Available | Positive | 1299064 - 1299714 | 23621.4 |
| diacylglycerol kinase | PS417_RS21980 | Not Available | Positive | 1299790 - 1300152 | 12984.3 |
| Lysr family transcriptional regulator | PS417_RS21975 | Not Available | Negative | 1300156 - 1301082 | 34239.1 |
| Attl | Not Available | Not Available | Positive | 2135322 - 2135338 | Not Available |
| Endonuclease | PS417_RS18065 | Not Available | Negative | 2141126 - 2141788 | 25390.0 |
| Putative recombinase rect | PS417_RS18060 | Not Available | Negative | 2141785 - 2142753 | 35150.6 |
| Hypothetical protein | PS417_RS18055 | Not Available | Negative | 2142807 - 2143922 | 41700.7 |
| hypothetical protein | PS417_RS18050 | Not Available | Negative | 2144025 - 2144252 | 8402.9 |
| hypothetical protein | PS417_RS18045 | Not Available | Negative | 2144242 - 2144478 | 8990.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
