Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PS417_RS26350 | Not Available | Negative | 300133 - 300498 | 13346.0 |
| chase2 domain-containing protein | PS417_RS26345 | Not Available | Negative | 300536 - 301882 | 50046.5 |
| nad-dependent epimerase/dehydratase family protein | PS417_RS26340 | Not Available | Positive | 302396 - 303328 | 32987.3 |
| bifunctional glycoside hydrolase 114/ polysaccharide deacetylase family protein | PS417_RS26335 | Not Available | Positive | 303391 - 306204 | 104380.0 |
| tetratricopeptide repeat protein | PS417_RS26330 | Not Available | Positive | 306182 - 309781 | 135622.0 |
| hypothetical protein | PS417_RS26325 | Not Available | Positive | 309808 - 310326 | 18737.1 |
| peld ggdef domain-containing protein | PS417_RS26320 | Not Available | Positive | 310332 - 311699 | 50558.7 |
| heat repeat domain-containing protein | PS417_RS26315 | Not Available | Positive | 311677 - 312672 | 36416.3 |
| gt4 family glycosyltransferase pelf | PS417_RS26310 | Not Available | Positive | 312662 - 314176 | 56181.5 |
| exopolysaccharide pel transporter pelg | PS417_RS26305 | Not Available | Positive | 314177 - 315547 | 51366.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
