Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PS417_RS26450 | Not Available | Negative | 277883 - 278770 | 32873.9 |
| peptidoglycan-binding protein lysm | PS417_RS26445 | Not Available | Positive | 278903 - 279343 | 15448.5 |
| gmp/imp nucleotidase | PS417_RS26440 | Not Available | Negative | 279485 - 280147 | 25119.2 |
| adp compounds hydrolase nude | PS417_RS26435 | Not Available | Positive | 280235 - 280801 | 21023.1 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | PS417_RS26430 | Not Available | Positive | 280798 - 281634 | 29765.3 |
| yiid c-terminal domain-containing protein | PS417_RS26425 | Not Available | Negative | 281761 - 282216 | 17256.8 |
| sigma-54-dependent transcriptional regulator | PS417_RS26420 | Not Available | Negative | 282243 - 283619 | 50213.4 |
| sensor histidine kinase | PS417_RS26415 | Not Available | Negative | 283616 - 285424 | 66723.8 |
| dtdp-4-dehydrorhamnose reductase | PS417_RS26410 | Not Available | Negative | 285461 - 286330 | 31862.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | PS417_RS26405 | Not Available | Negative | 286327 - 286872 | 20592.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
