Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1493 family protein | PS417_RS26495 | Not Available | Negative | 267911 - 268267 | 13556.3 |
| hypothetical protein | PS417_RS26490 | Not Available | Negative | 268878 - 269123 | 9282.99 |
| putative adenosine monophosphate-protein transferase fic | PS417_RS26485 | Not Available | Negative | 269096 - 269695 | 22616.0 |
| yhfg family protein | PS417_RS28385 | Not Available | Negative | 269695 - 269865 | 6602.75 |
| tetratricopeptide repeat protein | PS417_RS26480 | Not Available | Positive | 270041 - 271216 | 42338.9 |
| atp-dependent dna helicase recq | PS417_RS26475 | Not Available | Positive | 271501 - 273438 | 72336.7 |
| acyl-coa thioesterase | PS417_RS26470 | Not Available | Positive | 273461 - 273892 | 15928.8 |
| glycine zipper domain-containing protein | PS417_RS26465 | Not Available | Negative | 273918 - 274397 | 15367.0 |
| fdhf/ydep family oxidoreductase | PS417_RS26460 | Not Available | Negative | 274601 - 276949 | 86553.0 |
| formate dehydrogenase accessory sulfurtransferase fdhd | PS417_RS26455 | Not Available | Negative | 276946 - 277785 | 29890.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
