Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator ompr | PS417_RS26545 | Not Available | Positive | 258394 - 259134 | 27375.0 |
| atp-binding protein | PS417_RS26540 | Not Available | Positive | 259252 - 260565 | 49091.4 |
| 30s ribosomal protein s6--l-glutamate ligase | PS417_RS26535 | Not Available | Negative | 260706 - 261611 | 32513.0 |
| atp-dependent zinc protease | PS417_RS26530 | Not Available | Negative | 261608 - 262057 | 16441.1 |
| eal domain-containing protein | PS417_RS26525 | Not Available | Negative | 262104 - 262883 | 29270.8 |
| rna-binding s4 domain-containing protein | PS417_RS26520 | Not Available | Positive | 262999 - 263406 | 15192.1 |
| phosphatase pap2 family protein | PS417_RS26515 | Not Available | Negative | 263446 - 264246 | 29739.2 |
| hsp33 family molecular chaperone hslo | PS417_RS26510 | Not Available | Positive | 264351 - 265253 | 33419.4 |
| phosphoenolpyruvate carboxykinase | PS417_RS26505 | Not Available | Positive | 265433 - 266974 | 55419.6 |
| dmt family transporter | PS417_RS26500 | Not Available | Negative | 267031 - 267882 | 29352.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
