Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline bcct transporter bett | PS417_RS26595 | Not Available | Positive | 245088 - 247049 | 72148.0 |
| oprd family outer membrane porin | PS417_RS26590 | Not Available | Positive | 247229 - 248557 | 47832.1 |
| l-glyceraldehyde 3-phosphate reductase | PS417_RS26585 | Not Available | Positive | 248666 - 249703 | 38065.1 |
| taurine dioxygenase | PS417_RS26580 | Not Available | Negative | 249832 - 250668 | 31252.0 |
| taurine abc transporter permease tauc | PS417_RS26575 | Not Available | Negative | 250683 - 251519 | 29591.3 |
| taurine abc transporter atp-binding subunit | PS417_RS26570 | Not Available | Negative | 251516 - 252295 | 28207.2 |
| taurine abc transporter substrate-binding protein | PS417_RS26565 | Not Available | Negative | 252312 - 253289 | 34319.3 |
| glutamate--cysteine ligase | PS417_RS26560 | Not Available | Negative | 253531 - 255114 | 59227.3 |
| paai family thioesterase | PS417_RS26555 | Not Available | Negative | 255329 - 255712 | 13639.5 |
| tex family protein | PS417_RS26550 | Not Available | Negative | 255712 - 258036 | 84859.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
