Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metq/nlpa family abc transporter substrate-binding protein | PS417_RS26645 | Not Available | Negative | 234306 - 235121 | 29291.4 |
| llm class flavin-dependent oxidoreductase | PS417_RS26640 | Not Available | Negative | 235175 - 236527 | 50560.6 |
| sfnb family sulfur acquisition oxidoreductase | PS417_RS26635 | Not Available | Negative | 236527 - 237720 | 43129.8 |
| sfnb family sulfur acquisition oxidoreductase | PS417_RS26630 | Not Available | Negative | 237745 - 238986 | 44937.5 |
| hypothetical protein | PS417_RS26625 | Not Available | Negative | 239173 - 239937 | 27426.1 |
| l-cystine abc transporter atp-binding protein tcyn | PS417_RS26620 | Not Available | Negative | 240309 - 241055 | 27467.4 |
| cystine abc transporter permease | PS417_RS26615 | Not Available | Negative | 241059 - 241724 | 24482.4 |
| cystine abc transporter substrate-binding protein | PS417_RS26610 | Not Available | Negative | 241724 - 242518 | 28675.6 |
| d-cysteine desulfhydrase | PS417_RS26605 | Not Available | Negative | 242694 - 243686 | 34973.0 |
| serine o-acetyltransferase epsc | PS417_RS26600 | Not Available | Positive | 243852 - 244778 | 33400.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
