Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | PS417_RS26740 | Not Available | Positive | 212940 - 213626 | 25541.1 |
| response regulator | PS417_RS26735 | Not Available | Positive | 213664 - 214029 | 13688.7 |
| arac family transcriptional regulator | PS417_RS26730 | Not Available | Negative | 214157 - 215161 | 37388.4 |
| fatty acid desaturase | PS417_RS27695 | Not Available | Positive | 215262 - 216356 | 41021.2 |
| cynx/nimt family mfs transporter | PS417_RS26725 | Not Available | Negative | 216493 - 217662 | 41662.9 |
| lysr family transcriptional regulator | PS417_RS26720 | Not Available | Positive | 217839 - 218690 | 30896.4 |
| alpha/beta hydrolase | PS417_RS26715 | Not Available | Positive | 218917 - 219498 | 21290.1 |
| sigma 54-interacting transcriptional regulator | PS417_RS26710 | Not Available | Positive | 219549 - 220475 | 33589.0 |
| metq/nlpa family abc transporter substrate-binding protein | PS417_RS26705 | Not Available | Positive | 220602 - 221384 | 28177.1 |
| amino acid abc transporter permease | PS417_RS26700 | Not Available | Positive | 221869 - 222534 | 24245.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
