Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hdod domain-containing protein | PS417_RS26790 | Not Available | Positive | 202271 - 203479 | 44270.8 |
| ggdef domain-containing protein | PS417_RS26785 | Not Available | Negative | 203482 - 204483 | 37182.1 |
| delta-9 fatty acid desaturase desa | PS417_RS26780 | Not Available | Negative | 204672 - 205856 | 45461.3 |
| phosphodiesterase diba | PS417_RS26775 | Not Available | Positive | 206023 - 207936 | 71667.0 |
| sulfur starvation response protein osca | PS417_RS26770 | Not Available | Positive | 208148 - 208330 | 6719.01 |
| sulfate abc transporter substrate-binding protein | PS417_RS26765 | Not Available | Positive | 208404 - 209414 | 36769.4 |
| sulfate abc transporter permease subunit cyst | PS417_RS26760 | Not Available | Positive | 209573 - 210391 | 29536.3 |
| sulfate abc transporter permease subunit cysw | PS417_RS26755 | Not Available | Positive | 210405 - 211277 | 31392.0 |
| sulfate/molybdate abc transporter atp-binding protein | PS417_RS26750 | Not Available | Positive | 211281 - 212261 | 36690.9 |
| duf962 domain-containing protein | PS417_RS26745 | Not Available | Negative | 212332 - 212856 | 18952.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
